Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890619.1_cds_XP_016445362.1_40331
CDS Infomation

[gene=LOC107770553] [db_xref=GeneID:107770553] [protein=LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial] [exception=unclassified translation discrepancy] [protein_id=XP_016445362.1] [location=join(60124..60234,60236..60431,61052..62169)] [gbkey=CDS]
Sequence

ATGGCCAAACAAGGCCTTGAAATGAAATTCAAGGAATCCGATACTCTGTTAAACCAATGT
ATAAACCAAAGGGCTATAAGAGAAGGCCAAAGGGTACATACCCACATGATCAAATTCAAA
ACCTATTATCAACCTCCAGTGTACCTCAGGACAAGGCTGATCGTTTTCTACATAAAATGT
GAGCTTTTAGGTGATGCTAGGTGGGTGTTTGATGAAATGCCTGATAGAAATGTTGTTTCT
TCGTCTGCTCTTATTTCTGGGTATGTCTCTGAAGCTCTCCATCTTTTTGTTCAGATGTTG
AGATCAGGTACTGAGCCAAATGAGTTTACATTTGCAACCGTACTTACATCATGTATTGGC
GCCGTTGGGTTTCATTTTGGGAGAAAAGTCCATTGTCTTGTGGTCAAGAGCCCTTTTGAA
TCACATATATATGTGGGAAGCTCACTCCTTGATATGTATGCCAAAGCTGGCAAAGTCAAT
GATGCTCGAGATGTTTTTGAACGCCTGCCAGAAAGAGATGTTGTCTCTTGTACTGCTATA
ATCTCAGGCTATGCTCAACAAGGACTAGATGAAGAGGCACTAGAGCTTTTCCGCAAGTTA
CAAGCAGAGGGAATGTCTTCCAACTATGTTACATATGCTAGTGTATTAACGGCCTTATCT
CGACTTGCTGCGGTGGAACTAGGTAGACAATTGCATGCCCATATTATTCGATTGGAACTA
CCCTTCTACGCGGTGCTTCAGAATTCTCTCGTTGATATGTACTCGAAGTGTGGAAACCTC
GCTTATTCAAGGAGGGTATTCAATCAAATGTCTGAAAAAACTGTGAGCTCCTGGAATGCC
ATGCTTGTTGGTTACAGTAAACATGGGATGGGAAAAGAGGTAGTTGAGCTCTTTGAAATG
ATGAGAGAAGAAAACAAGATCAAGCCTGATGGCATCACTCTTTTGGCTGTGTTATCTGGT
TGCAGCCACGGAGGAATGGAGGATAAAGGTGTACAGATTTTCAACGAAATAAGTATTGGC
AAAGACAGGGTCGAGGTTAGCATTGAGCACTATGGTTGTGTGGTTGATTTGGTAAGTCGA
GCTGGCCAAGTAGAAAGGGCCTTTCAATTCATCAGAGAGATGCCTTTTCCACCAACTGCT
GCAATTCTGGGTTCACTTTTAGGTGCTTGCTGGGCTCACCTGTGTGTTGATATTGGTGAA
ATTGTAGTCAAACAACTTTTGGAGATAGAGCCAGAAAATTCTGGAACTTATGTGATCCTT
TCGAACTTGTATGCATCGGCAGGAAGGTGGGAAGATGCAAGAAGTGCAAGAGATATGATA
AACGAACGGGCCATTGTAAAGGAATCCGGAAAAAGCTGGATTGGTCCTGATCTTATCCAT
GAAACAGAGAAGGATATAGCAAAATGTAGTGGAATTAGCAGTTAG

Peptide Sequence

PEP ID

XP_016445362.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Nicotiana tabacum]
Sequence

MAKQGLEMKFKESDTLLNQCINQRAIREGQRVHTHMIKFKTYYQPPVYLRTRLIVFYIKC
ELLGDARWVFDEMPDRNVVSSSALISGYVSEALHLFVQMLRSGTEPNEFTFATVLTSCIG
AVGFHFGRKVHCLVVKSPFESHIYVGSSLLDMYAKAGKVNDARDVFERLPERDVVSCTAI
ISGYAQQGLDEEALELFRKLQAEGMSSNYVTYASVLTALSRLAAVELGRQLHAHIIRLEL
PFYAVLQNSLVDMYSKCGNLAYSRRVFNQMSEKTVSSWNAMLVGYSKHGMGKEVVELFEM
MREENKIKPDGITLLAVLSGCSHGGMEDKGVQIFNEISIGKDRVEVSIEHYGCVVDLVSR
AGQVERAFQFIREMPFPPTAAILGSLLGACWAHLCVDIGEIVVKQLLEIEPENSGTYVIL
SNLYASAGRWEDARSARDMINERAIVKESGKSWIGPDLIHETEKDIAKCSGISS

Transcript Sequence

Gene sequence data has not been registered.